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Protein Search

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Resource Description Type
AFDB Clusters Database Database of UniProt predicted structures clustered with foldseek
AFESM Clusters Database Database of UniProt and Metagenome predicted structures clustered with foldseek
Evolutionary Scale Modelling Atlas of structures 770 million ESMFold predicted structures -- much faster calculations as the don't relying on explicity co-evolutionary multiple sequence alignments
AlphaFold Protein Structure database 200 million AF2 predicted protein structures, with AlphaMissense etc included
FoldSeek web server Structure Alignment in a browser