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Activity in progress: nf-core ProteinFold at Pawsey

Details

  • Deep Learning models work natively with NVIDIA hardware.
  • Setonix at Pawsey contains a large number of AMD GPUs.
  • Models can be made to work with AMD hardware available at Pawsey.

Completed

  • Build AMD compatible container for AlphaFold2.
  • Build AMD compatible container for Boltz-1.
  • Build AMD compatible container for ESMFold.

In Progress

  • Adapt containers for compatibility with nf-core proteinfold.
  • Test nfcore proteinfold workflow at Pawsey.

Future

  • Build AMD compatible container for Boltz-2.
  • ProteinFold config optimized for Pawsey.
Contributors