The software listed here is made available on Australian national infrastructure in support of activities across the ASBC community.
| Resource | Description | DOI | Type |
|---|---|---|---|
| RFdiffusion | Diffusion-based model to generate new protein structures. | DOI | |
| ProteinMPNN | Predicts a sequence composition compatible with an input target structure. | DOI | |
| ESMFold | Predicts the structure of a target sequence using the ESM pre-trained language model. | DOI | |
| ColabFold | Predicts the structure of target proteins using MSAs generated by MMSeqs2. | DOI | |
| Boltz-2 | Predicts the structure of target molecules (proteins, nucleic acids, small molecules) using MSAs generated by MMSeqs2. | DOI | |
| AlphaFold2 | Predicts the structure of target proteins using MSAs generated by hhblits/jackhmmer. | DOI | |
| nf-core ProteinFold v2.0.0 | A nextflow pipeline with support for numerous structure prediction tools. | DOI |